Dashboard

Name - Perfect_adaptation

BioModel ID - 188456707

Reaction Diagram

reactionDiagram

Physiology

Reactions See in Dashboard
Reaction Name Structure Kinetics
X --> X_degradation c0 MassAction

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Text Annotations:

Reaction rate: (Kf * X) [uM.s-1]

Reaction rate: k4 [s-1]

Reaction rate: 0.0 [uM.s-1]

Reaction rate: 1.0 [s-1]

--> X X_synthesis c0 GeneralKinetics

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Reaction rate: (k3 * S) [uM.s-1]

Reaction rate: 1.0 [s-1]

--> R R_synthesis c0 GeneralKinetics

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Reaction rate: (k1 * S) [uM.s-1]

Reaction rate: 2.0 [s-1]

R --> R_degradation c0 GeneralKinetics

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Text Annotations:

Reaction rate: (k2 * X * R) [uM.s-1]

Reaction rate: 2.0 [s-1.uM-1]

Structures See in Dashboard
Name Type Electrical (Membrane Polarity)
c0 Compartment (+)   (-)

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Species See in Dashboard
Name Structure
S c0

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R c0

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X c0

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Molecules See in Dashboard
Name Description
S

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R

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X

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Observables See in Dashboard
Name Type BioNetGen Defination Count
O0_S_tot Molecules S Multimolecular

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O0_R_tot Molecules R Multimolecular

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O0_X_tot Molecules X Multimolecular

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Applications

Applications
Name Math Type Annotation
PerfectlyAdapted

0 - PerfectlyAdapted

Specifications(Species) - PerfectlyAdapted
Species Initial Condition Diffusion Constant
S 1.0 0.0
R 0.0 0.0
X 0.0 0.0
Specifications(Reaction) - PerfectlyAdapted
Name Reaction Mapping
X_degradation included
X_synthesis included
R_synthesis included
R_degradation included
Simulations - PerfectlyAdapted
Name End Time Output Options
Simulation0 20.0 every

Global Parameters

Global Parameters See in Dashboard
Name Expression