Dashboard

Name - Protein_phosphorylation_sigmoidal

BioModel ID - 176188288

Reaction Diagram

reactionDiagram

Physiology

Reactions See in Dashboard
Reaction Name Structure Kinetics
R --> PR protein_phos c0 HMMIrreversible

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Reaction rate: ((Vmax * R) / (Km + R)) [uM.s-1]

Reaction rate: 1.0 [uM]

Reaction rate: S [uM.s-1]

PR --> R protein_dephos c0 HMMIrreversible

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Reaction rate: ((Vmax * PR) / (Km + PR)) [uM.s-1]

Reaction rate: 1.0 [uM]

Reaction rate: 1.0 [uM.s-1]

Structures See in Dashboard
Name Type Electrical (Membrane Polarity)
c0 Compartment (+)   (-)

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Species See in Dashboard
Name Structure
S c0

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R c0

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PR c0

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Molecules See in Dashboard
Name Description
R mod ~P ~U .

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S

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Observables See in Dashboard
Name Type BioNetGen Defination Count
O0_R_tot Molecules R Multimolecular

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O0_S_tot Molecules S Multimolecular

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Applications

Applications
Name Math Type Annotation
Sigmoidal

0 - Sigmoidal

Specifications(Species) - Sigmoidal
Species Initial Condition Diffusion Constant
S t 0.0
R 1.0 0.0
PR 0.0 0.0
Specifications(Reaction) - Sigmoidal
Name Reaction Mapping
protein_phos included
protein_dephos included
Simulations - Sigmoidal
Name End Time Output Options
Simulation0 5.0 every

Global Parameters

Global Parameters See in Dashboard
Name Expression