Reactions | Name | Structure | Kinetics |
---|---|---|---|
RhoGTP Effector Effector_RhoGTP | Effector_activation | default | GeneralKinetics |
RhoGTP RhoGDP | RhoGTP_to_RhoGDP | default | GeneralKinetics |
RhoGDP RhoGTP | RhoGDP_to_RhoGTP | default | GeneralKinetics |
reaction rate
((k8 * RhoGTP * Effector) - (k9 * Effector_RhoGTP)) [umol.l-1.min-1]
Name | Type | Electrical |
---|---|---|
default | Compartment | (+) (-) |
Name | Structure |
---|---|
Active_GEF | default |
RhoGDP | default |
RhoGTP | default |
GDI | default |
GAP | default |
Effector | default |
Effector_RhoGTP | default |
Name | Domain | Molecular Type | Sequence Type |
---|---|---|---|
O0_RhoGEF_tot | Molecules | RhoGEF | Multimolecular |
O0_G_protein_tot | Molecules | G_protein | Multimolecular |
O0_GDI_tot | Molecules | GDI | Multimolecular |
O0_RhoGAP_tot | Molecules | RhoGAP | Multimolecular |
O0_Effector_tot | Molecules | Effector | Multimolecular |
Name | Properties | Math Type |
---|---|---|
GDI_integrated |
Specs -
Species Specs - Reaction Simulations |
Name | End Time | Output Options |
---|---|---|
Simulation0 | 600.0 | every |
Name | Expression |
---|---|
k3 | 0.5[min-1] |
k2 | 0.1[min-1] |
kcatGEF | 5.64[min-1] |
KmGEFRho | 24.5[umol.l-1] |
KmGEFGDI | 1.0[umol.l-1] |
k1 | 1.0[l.umol-1.min-1] |
kcatGAP | 95.9[min-1] |
KmGAPGDI | 0.1[umol.l-1] |
KmGAPRho | 4.48[umol.l-1] |
k5 | 0.05[min-1] |
k4 | 0.5[l.umol-1.min-1] |
k6 | 0.5[l.umol-1.min-1] |
k7 | 0.05[min-1] |
k8 | 28.2[l.umol-1.min-1] |
k9 | 0.18[min-1] |